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Update

Indirect Tax Quarterly Milestones (July-September 2025)

06 Nov 2025

Competition Quarterly Milestones (January to March 2025)

In this update:

  • Bombay High Court allows inter-state transfer of unutilised input tax credit pursuant to amalgamation
  • Karnataka High Court quashes Integrated Goods and Services Tax demand on salaries paid by Indian entity to seconded expatriate employees
  • Delhi High Court holds no Integrated Goods and Services Tax leviable under Section 3(7) of Customs Tariff Act, 1975 on reimports after repairs abroad
  • Proposed amendments to Goods and Services Tax regime relating to place of supply rules for intermediary services, provisional refunds, and post-sale discounts in valuation of supplies

Partner: Himanshu Sinha, Senior Associate: Samyak Jain, Associate: Advetita

Key Developments

1.Bombay High Court allows inter-state transfer of unutilised input tax credit pursuant to amalgamation

In a significant judgment, the Bombay High Court has ruled that the transfer of unutilised Input Tax Credit (ITC) between amalgamating companies registered in different states is permissible under Section 18(3) of the Central Goods and Services Tax Act, 2017 (CGST Act) and Rule 41 of the Central Goods and Services Tax Rules, 2017 (CGST Rules).1 The Court noted that a combined reading of these provisions establishes the legal framework for transferring ITC during business restructuring due to mergers, amalgamations, demergers, and similar transactions.

The Court emphasised that the primary objective of GST was to allow seamless credit across the supply chain and avoid the cascading effect of tax. It noted that neither Section 18(3) nor Rule 41 imposed any restriction on the transfer of ITC based solely on the geographical location of the transferor and transferee. The Court criticised the GSTN portal’s design for imposing limitations not supported by law and held that technical constraints cannot override statutory entitlements.

While the Court upheld the legality of transferring Central Goods and Services Tax (CGST) and Integrated Goods and Services Tax (IGST) credits across states post-amalgamation, it refrained from directing the transfer of State Goods and Services Tax (SGST) credits. This was due to concerns raised by revenue authorities regarding potential revenue loss to the originating state (Goa, in this case). The petitioner volunteered to forego the SGST credit, enabling the Court to safeguard taxpayer rights without triggering a conflict over inter-state SGST adjustments, which remain unresolved.

The Court reaffirmed the principle of legislative intent – that conditions not expressly stated in law cannot be read into it. This provides a favourable precedent for the legal position on inter-state ITC transfer post-amalgamation and also underscores the need for technical upgrades to the GSTN portal to ensure seamless credit flow in line with statutory provisions. It remains to be seen whether courts will adopt a similar approach when dealing with SGST credit transfers in the future.

2.Karnataka High Court quashes Integrated Goods and Services Tax demand on salaries paid by Indian entity to seconded expatriate employees

The Karnataka High Court has ruled that if a genuine employer-employee relationship exists, salaries paid by an Indian company to expatriate employees seconded from an overseas group company are not liable to IGST.2

This decision diverges from the Supreme Court’s earlier ruling in the Northern Operating Systems (NOS) case,3 where secondment was deemed a taxable supply of manpower services. The High Court emphasised the following key factual distinctions in the present case:

  • The seconded employees were fully integrated into the Indian entity through independent employment contracts.
  • Salaries were paid directly by the Indian entity, with appropriate tax deducted at source.
  • The Indian entity exercised exclusive control over the seconded employees’ roles, human resource functions, and performance management.

Crucially, no mark-up was charged by the foreign entity to the Indian entity for the secondment, which, in the High Court’s view, reinforced the conclusion that the arrangement was not in the nature of a service transaction liable to tax, as outlined in the NOS case. Instead, the Court held that these factors collectively indicated an employer-employee relationship, falling outside the scope of supply defined under Schedule III of the CGST Act.

As an alternative argument, the Court relied on the Central Board of Indirect Taxes and Customs (CBIC) Circular No. 210/4/2024-GST, which clarifies that for related parties, where the Indian recipient is eligible to full ITC, and the Indian recipient has not raised an invoice for such arrangement (this is required under GST laws for services imported into India), the value of such services may be deemed to be ‘nil’. Accordingly, no GST was payable on the receipt of such services by the Indian host entity. The High Court concurred with a similar view taken by the Delhi High Court and held that this binding CBIC circular further neutralises any potential tax liability, even if the secondment was considered a taxable supply.

This judgment provides a notable precedent for Indian entities who have seconded employees. Businesses must carefully assess whether their secondment structures demonstrate a genuine employer-employee relationship. Where such a relationship is evident, and especially where no mark-up is charged by the foreign supplier, this ruling, supported by the CBIC circular, offers a robust defence against IGST demands.

3.Delhi High Court holds no Integrated Goods and Services Tax leviable under Section 3(7) of Customs Tariff Act, 1975 on reimports after repairs abroad

The Delhi High Court has ruled that additional IGST cannot be imposed under the Customs Tariff Act, 1975 (CTA) on goods re-imported into India after undergoing repairs abroad.4

The Court held that such a transaction constitutes an “import of service” which is taxable exclusively under Section 5(1) of the Integrated Goods and Services Tax Act, 2017 (IGST Act). Consequently, the Court declared Notification No. 36/2021-Customs and Circular No. 16/2021-Customs to be unconstitutional and ultra vires the IGST Act to the extent they sought to impose an additional IGST levy on the value of repairs.

The Court held that once a transaction has been classified and taxed as a “supply of service” under the IGST Act, the authorities cannot re-characterise it as a supply of “goods” to impose an additional tax under a different statute (the CTA). The essential nature of the transaction was the provision of repair services, not the sale of goods.

The Court also held that levying IGST first on the import of service under Section 5(1) of the IGST Act and again on the value of the same service under Section 3(7) of the CTA upon re-import amounted to taxing the same transaction twice. This constituted impermissible double taxation on a single transaction, which is unconstitutional.

The Court clarified that Section 3(7) of the CTA was merely a part of the composite machinery for tax collection. It designates the customs frontier as the point of tax discharge for IGST on imported goods and does not contain the legislative power to impose a fresh tax on a service already subjected to IGST under its parent statute.

This judgment provides significant and much-needed relief to key sectors, notably aviation, shipping, oil and gas, and heavy engineering, which regularly send critical and high-value equipment abroad for repairs and maintenance.

The elimination of the double taxation burden directly reduces operational costs and improves cash flow. It provides certainty and clarity on tax positions, allowing businesses to plan their Maintenance, Repair, and Operations (MRO) activities without the risk of incurring substantial, duplicated tax liabilities. Further, the ruling opens a clear pathway for affected taxpayers to claim refunds of additional IGST that may have been paid under protest or erroneously since the 2021 notification was issued.

By firmly demarcating the boundaries between GST and Customs law and upholding the principles laid down by the Supreme Court in Mohit Minerals,5 the Delhi High Court has reinforced the constitutional scheme of taxation. The customs department has challenged the decision before the Supreme Court. 

4.Proposed amendments to Goods and Services Tax regime relating to place of supply rules for intermediary services, provisional refunds, and post-sale discounts in valuation of supplies

In its 56th meeting, the GST Council proposed several amendments to GST laws to simplify substantive and procedural provisions and clarify issues that have been frequently litigated. These include:

  • Place of supply rules for intermediary services to be changed to recipient-based from supplier-based to allow claims for export benefits

    Section 13(8)(b) of the IGST Act deems the place of supply of intermediary services to be the location of the service supplier and not the recipient. This legal fiction posed significant challenges for India’s services export sector. IT, consulting, and Business Process Outsourcing (through global capability centres) have been severely impacted, as services provided by them to foreign clients are treated as domestic supplies. As a result, such services are denied export status, rendering Indian firms ineligible for zero-rated benefits and the corresponding refunds of unutilised ITC.

    To address this, the GST Council has recommended omitting Section 13(8)(b) altogether. Consequently, the place of supply for intermediary services will be determined by the default rule under Section 13(2) of the IGST Act, i.e., the location of the recipient of the service. This will align with the destination-based principle of GST, allowing Indian service providers to qualify for export benefits and improving their global competitiveness. However, the change will also make intermediary services received by an Indian entity from overseas entity subject to GST on a reverse charge basis, potentially increasing tax costs for businesses with limited ITC eligibility.

  • Introduction of a system-driven, risk-based provisional refund mechanism for refund claims made on account of ‘zero rated supply’ and ‘inverted duty structure’

    To improve liquidity for businesses, the Council has recommended a new automated mechanism to sanction 90% of refunds claimed on a provisional basis for claims related to ‘zero-rated supplies’ and ‘inverted duty structure’ (IDS).

    For zero-rated supplies, the existing framework under Section 54(6) and Rule 91 of the CGST Rules is being strengthened. Notification No. 13/2025-Central Tax has amended Rule 91(2) to mandate that a provisional refund order (Form RFD-04) be issued within 7 days, based on a system-driven risk evaluation. This rule change became effective on 1 October 2025, with the overall framework expected to be fully operational from 1 November 2025.

    For IDS refunds, the Council has proposed amending Section 54(6) of the CGST Act to extend the same provisional refund facility. Pending this, the Council has recommended that interim instructions be issued to field formations to immediately begin granting 90% provisional refunds based on risk assessment. This move provides immediate relief without waiting for the formal amendment.

    However, this provisional refund facility will not be available to certain classes of persons, including those who have not completed Aadhaar authentication and suppliers of specified goods such as pan masala, tobacco, and areca nuts.6

  • Simplification of post-sale discounts

    The GST Council has proposed significant amendments to simplify the complex rules surrounding the treatment of post-sale discounts. The key recommendation is the omission of Section 15(3)(b)(i) of the CGST Act, which will remove the contentious condition that a post-sale discount can only be deducted from the transaction value if it was established through a pre-supply agreement and linked to specific invoices.

    The Council has further proposed that Section 15(3)(b) be amended to mandate that such discounts must be given through a credit note issued under Section 34 of the CGST Act. Correspondingly, Section 34 will be amended to ensure that the recipient reverses the proportionate ITC when a credit note reduces the value of the supply.

The recommendations from the 56th GST Council meeting represent a significant step towards a more mature and business-friendly GST regime. For the services export sector, the proposed omission of Section 13(8)(b) is a watershed moment that will resolve years of litigation, unlock working capital, and enhance the global competitiveness of Indian firms. The introduction of an automated, risk-based provisional refund system for both zero-rated and IDS claims is a major liquidity-boosting measure that will directly benefit exporters and manufacturers by expediting cash flows. Finally, the simplification of rules for post-sale discounts will align the law with common trade practices, reduce compliance burdens, and provide much-needed legal certainty. Collectively, these reforms are expected to reduce litigation, improve the ease of doing business, and foster a more transparent and efficient indirect tax environment.


[1] Umicore Autocat India Private Limited, (after amalgamation of M/s Umicore Anandeya India Private Limited) v Union of India and Ors, 2025 (7) TMI 1188 – Bombay High Court

[2] M/s. Alstom Transport India Limited v Commissioner of Commercial Taxes, 2025 (7) TMI 1611 – Karnataka High Court

[3] C.C.,C.E. & S.T. – Bangalore (Adjudication) Etc. v M/s Northern Operating Systems Pvt Ltd., 2022 (5) TMI 967 – Supreme Court

[4] Interglobe Aviation Ltd. v Principal Commissioner of Customs Acc (Import) New Custom House New Delhi & Ors., 2025 (3) TMI 347 – Delhi High Court

[5] Union of India & Anr. v M/s Mohit Minerals Pvt. Ltd. Through Director, 2022 (5) TMI 968 – SC

[6] Notification No. 14/2025-Central Tax, dated 17 September 2025


If you require any further information about the material contained in this newsletter, please get in touch with your Trilegal relationship partner or send an email to alerts@trilegal.com. The contents of this newsletter are intended for informational purposes only and are not in the nature of a legal opinion. Readers are encouraged to seek legal counsel prior to acting upon any of the information provided herein.

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